PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS70340.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 147aa    MW: 16526.8 Da    PI: 8.0119
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS70340.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.3e-121558855
                HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                 Er RR+++++ f++L  llP+ +     +K +K++++ +Av+YIk+L+
  EPS70340.1 15 TERERRKKMRNMFSNLHALLPHiP-----PKADKSTVVDEAVKYIKKLE 58
                6*********************88.....8****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.06E-14670IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.605757IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.44E-111262No hitNo description
Gene3DG3DSA:4.10.280.101.9E-131266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-71563IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-91558IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
GSGEESDDHD LHIWTERERR KKMRNMFSNL HALLPHIPPK ADKSTVVDEA VKYIKKLEDL  60
AEEMEKLRAE RPSPTPVCRN PIPNPGQDFP ATFKTWTSAN VTVNVCGRDA HISICSGRSR  120
RRSGLLTGVC SVMEKHELEL VSAHISS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088239.12e-54PREDICTED: transcription factor bHLH95-like isoform X1
RefseqXP_011088240.12e-54PREDICTED: transcription factor bHLH95-like isoform X2
SwissprotQ9FXA32e-37BH095_ARATH; Transcription factor bHLH95
TrEMBLS8CU831e-107S8CU83_9LAMI; Uncharacterized protein (Fragment)
STRINGVIT_03s0063g00170.t012e-46(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13242369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-33bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]